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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015840622.1_cds_XP_016507670.1_20769
CDS Infomation

[gene=LOC107825337] [db_xref=GeneID:107825337] [protein=importin beta-like SAD2] [protein_id=XP_016507670.1] [location=complement(join(1080..1246,2096..2318,2374..2492,2589..2630,2804..2963,3648..3828,3925..4048,4133..4278,5298..5471,5586..5770,5938..6060,6623..6785,7681..7830,7967..8054,8208..8343,9448..9537))] [gbkey=CDS]
Sequence

ATGGATCTTCAGAACCTTGCTATTGTTCTTCGTGGTGCACTTAGTCCTAATCCCGATGAG
CGTAAAGCTGCTGAAGACAGTCTTAATCAGTTTCAGTATACTCCCCAGCATCTTGTGAGG
TTGCTGCAAATCATAGTAGATGGGTCTTGCGACATGGCAATCCGGCAGGTGGCTAGCATT
CACTTTAAGAACTTCGTTGCAAAGAATTGGTCCCCTCATGATCCTGCTGAGCAATCAAAA
ATTCTGCCAAGTGATAAGGAATTGGTGAGGCAAAATATTCTCATATTCATTGCACAAGTT
CCCTCATTGCTGAGAGTACAGTTGGGGGAATGCCTTAAGACAATGATACATGCGGACTAC
CCGGAGCAGTGGCCAACACTTCTTCCATGGGTAAAGCATAATCTGCAGGATCAGCAAGTT
TATGGTGCTTTGTTTGTTCTGAGAATTCTCTCCAGGAAATATGAATTCAAATCTGATGAG
GAGAGGACACCTGTTTATCACATTGTTGAGGAAACTTTTCCACAGCTTCTCAACATATTC
AACAGGCTTGCTCAGATAGCAAATCCTTCCATTGAAGTAGCAGACTTGATCAAGCTCATT
TGCAAGATATTCTGGTCATCCATATATGCAAAGCTTGCACCATCTGTTTATTTTGGAATA
TTTTGGTTCTCTTATAAAGCTGTATGTCCTGATGTTGGTTGGTGTTTGCAAAACCCTTTT
AAGAAACATTTGGTCCGTGTGGGAGTTTCTTTGGAGATTCCGAAGCAGTTGTTTGATCCA
AATATGTTCAATGCCTGGATGGTCCTTTTCTTGAATATGTTGGAGAGGCCTGTCCCTCTG
GAAGGCCAACCAGCCGATCCAGAGCTAAGGAAATCATGGGGATGGTGGAAGGTGAAAAAG
TGGACAGTCCATATACTGAATCGACTATACACCCGGTTTGGAGATTTAAAACTTCAAAAC
CCAGACAACAAAGCTTTTGCTCAAATGTTTCAGAAGGGCTATGCGGGGAAAATTCTGGAG
TGCCACCTTAATTTGTTGAATGTTATACGCGCTGGTGGTTACTTGCCTGATAGAGTGATC
AACCTCATTTTGCAATACCTGAGCAATAGTATCTCAAAGAGTAACATGTACAGCTTGTTG
CAACCAAGACTTGATATTGTTCTTTTCGAGATCATCTTTCCACTTATGTGCTTCAGTGAT
AATGATCAAAAGCTCTGGGAGGAGGATCCACATGAATATGTTAGGAAGGGTTATGATATA
ATTGAGGACTTATATAGTCCCAGAACTGCTGCAATGGATTTTGTGAGCGAGTTAGTCCGG
AAGCGTGGTAAAGAGAACCTTCAAAAATTTATACTATTCATTGTCGAGATTTTTAAGAGA
TATGAGGAGGCAGCCCCAGAATACAAGCCATATAGGCAGAAAGACGGTGCTCTCCTTGCA
ATTGGAGCTCTATGTGATAAACTGAAACAAACCGAACCTTACAAATCAGAGCTTGAACGT
ATGCTTGTTCAACATGTATTCCCAGAATTTAGCAGTCCTGTGGGCCATCTTCGAGCCAAG
GCAGCATGGGTTGCAGGACAGTATGCCCATGTTAACTTTTCAGATCCAAATAACTTCCGC
AAGGCATTACACAGTGTTGTGGCTGGAATGCGTGATCCTGACCTCCCTGTTCGTGTTGAT
TCTGTTTTTGCTTTACGTTCGTTTGTTGAAGCCTGCAGAGATTTAGATGAAATCCGGCCC
ATTATCCCCCAACTACTTGATGAATTTTTCAAACTTATGAATGAAGTCGAGAATGAAGAT
CTTGTGTTTACACTTGAGACTATCGTTGACAAGTTTGGTGAGGAGATGGCTCCTTATGCT
CTTGGGCTATGCCAGAATTTGAAACTAATGAGGGTTGCATTTCAGGCTGCTGCATTTTGG
AAATGCATTAACACGTCGGAAGCAGATGAAGAAGGTGATGATCCTGGAGCTCTGGCTGCA
GTTGGCTGTTTACGGGCCATAAGCACAATTCTTGAGTCAGTGAGCAGGCTTCCGCACCTA
TTCATTCACATTGAGCCGACTCTCCTCCCAATAATGCGTAGGATGTTGACTACTGATGGA
CAAGAGGTCTTTGAAGAGGTATTGGAGATAGTTTCATACATGACATTCTTTTCGCCAACA
ATATCCATGGAAATGTGGAGTCTATGGCCATTGATGATGGAGGCTCTAGCAGACTGGGCT
ATTGACTTCTTCCCTAGTACGTCTAAACACTTTGATGTTACTGTTCCCTAA

Peptide Sequence

PEP ID

XP_016507670.1
PEP Infomation

PREDICTED: importin beta-like SAD2 [Nicotiana tabacum]
Sequence

MDLQNLAIVLRGALSPNPDERKAAEDSLNQFQYTPQHLVRLLQIIVDGSCDMAIRQVASI
HFKNFVAKNWSPHDPAEQSKILPSDKELVRQNILIFIAQVPSLLRVQLGECLKTMIHADY
PEQWPTLLPWVKHNLQDQQVYGALFVLRILSRKYEFKSDEERTPVYHIVEETFPQLLNIF
NRLAQIANPSIEVADLIKLICKIFWSSIYAKLAPSVYFGIFWFSYKAVCPDVGWCLQNPF
KKHLVRVGVSLEIPKQLFDPNMFNAWMVLFLNMLERPVPLEGQPADPELRKSWGWWKVKK
WTVHILNRLYTRFGDLKLQNPDNKAFAQMFQKGYAGKILECHLNLLNVIRAGGYLPDRVI
NLILQYLSNSISKSNMYSLLQPRLDIVLFEIIFPLMCFSDNDQKLWEEDPHEYVRKGYDI
IEDLYSPRTAAMDFVSELVRKRGKENLQKFILFIVEIFKRYEEAAPEYKPYRQKDGALLA
IGALCDKLKQTEPYKSELERMLVQHVFPEFSSPVGHLRAKAAWVAGQYAHVNFSDPNNFR
KALHSVVAGMRDPDLPVRVDSVFALRSFVEACRDLDEIRPIIPQLLDEFFKLMNEVENED
LVFTLETIVDKFGEEMAPYALGLCQNLKLMRVAFQAAAFWKCINTSEADEEGDDPGALAA
VGCLRAISTILESVSRLPHLFIHIEPTLLPIMRRMLTTDGQEVFEEVLEIVSYMTFFSPT
ISMEMWSLWPLMMEALADWAIDFFPSTSKHFDVTVP

Transcript Sequence

Gene sequence data has not been registered.